CDS

Accession Number TCMCG017C04941
gbkey CDS
Protein Id OMP08436.1
Location complement(join(23675..23797,24183..24224,24313..24363,25543..25593,26968..27025,28223..28308,28381..28429,28501..28592,29404..29490,29623..29684,30088..30156,30367..30649))
GeneID InterPro:IPR002198
Organism Corchorus olitorius
locus_tag COLO4_06473

Protein

Length 350aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01012723.1
Definition Short-chain dehydrogenase/reductase SDR [Corchorus olitorius]
Locus_tag COLO4_06473

EGGNOG-MAPPER Annotation

COG_category Q
Description Belongs to the short-chain dehydrogenases reductases (SDR) family
KEGG_TC -
KEGG_Module -
KEGG_Reaction R08914        [VIEW IN KEGG]
R08915        [VIEW IN KEGG]
R09069        [VIEW IN KEGG]
R09070        [VIEW IN KEGG]
KEGG_rclass RC00116        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K13606        [VIEW IN KEGG]
EC 1.1.1.294        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00860        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
map00860        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006778        [VIEW IN EMBL-EBI]
GO:0006787        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010304        [VIEW IN EMBL-EBI]
GO:0015994        [VIEW IN EMBL-EBI]
GO:0015996        [VIEW IN EMBL-EBI]
GO:0016491        [VIEW IN EMBL-EBI]
GO:0016614        [VIEW IN EMBL-EBI]
GO:0016616        [VIEW IN EMBL-EBI]
GO:0019439        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0030163        [VIEW IN EMBL-EBI]
GO:0033013        [VIEW IN EMBL-EBI]
GO:0033015        [VIEW IN EMBL-EBI]
GO:0034256        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042440        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044257        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044270        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046149        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046700        [VIEW IN EMBL-EBI]
GO:0051186        [VIEW IN EMBL-EBI]
GO:0051187        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901361        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGACTGCTACTGCTTCATCTACTTTCCAATTGTTGTCACCACCACCAAGAGCAAGAGCCCATGCTCATGCTATTATCTTCTCCAAAGCAACCCATTTTCAGCCTTACCTTGTTAATTCTAATTTCTCCTCCTTCTCTCCCTCTCCCTCTCCCTCTCCGGCTCCAACTCCAACTACTACCTTCACTTCCCCATTTTCACTTAAAGCCCAAGCCGCTACGCCTGGAGAGAGACAGCCCATGGTTCCTCCCTACAACGTTCTTATAACTGGCTCAAGCAAAGGGATAGGTTATGCATTGGCGAAAGAATTTTTGAGAGCAGGTGACAATGTCGTAATTTGTTCAAGATCTGCTGAAAGGGTGGAATCTGCTGTTAAAAGCCTCAGAGAAGAATATGGGGAGCAGCGTGTGTGGGGTACTCAGTGCGATGTTAGAGAGGCAGAGGATGTGAAGAATTTAGTTTCATTTGCACAGAAGAACCTAGGATACATTGATATATGGATTAATAATGCAGGATCAAATGCATATAGTTATAAGCCACTGGCTGAAGCATCAGATGAAGATCTTATGTGGGCCTCCTATACCATTCTCTTTGAAGTTGTTTCTACAAACACCCTTGGGTTGATGATTTGTTGCCGAGAGGCCATTAAGATGATGTTGCAGCAGCCTCGAGGCGGTCATATTTTCAATATTGATGGAGCTGGTTCTGATGGAAGACCAACCCCTAGATTTGCTGCATACGGAGCAACCAAACGTAGTGTAGTGCATTTGACAAAATCACTGCAGGCTGAACTGCGGATGCAAGACGTTAAAAACGTAGTAGTACATAATTTGTCGCCAGGAATGGTTACAACTGATCTTCTCATGTCTGGTGCAACCACGAAGCAGGCCAAGTTTTTTATCAATGTTTTAGCAGAACCAGCTGAAGTGGTTGCAGAATACCTCGTCCCAAATATCAGGTCTATCCCCGGCAATGGATCATGGAAGCCAACGTATATTAGGTTCCTCACTGGATTAAAAGCCTACTCTCAGATATTCTCAGTTAAGAAGTGA
Protein:  
MATATASSTFQLLSPPPRARAHAHAIIFSKATHFQPYLVNSNFSSFSPSPSPSPAPTPTTTFTSPFSLKAQAATPGERQPMVPPYNVLITGSSKGIGYALAKEFLRAGDNVVICSRSAERVESAVKSLREEYGEQRVWGTQCDVREAEDVKNLVSFAQKNLGYIDIWINNAGSNAYSYKPLAEASDEDLMWASYTILFEVVSTNTLGLMICCREAIKMMLQQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAELRMQDVKNVVVHNLSPGMVTTDLLMSGATTKQAKFFINVLAEPAEVVAEYLVPNIRSIPGNGSWKPTYIRFLTGLKAYSQIFSVKK